Research story 03 / Analytical chemistry · Embeddings
Can measurements learn a common language?
Learning representations of analytical chemistry measurements to automate their analysis.
From patterns to representations
Begin with experimental signals
XRPD traces from solid-form screening vary in peak shapes, backgrounds and preparation artefacts.
The scientific question
Can we learn useful representations of analytical measurements, so that comparison and interpretation become less dependent on repeated manual inspection? XRPD solid-form screening offers a concrete starting point.
The published starting point
SMolNet learns to compare pairs of XRPD patterns. The study uses 3,750 experimental measurements from 16 compounds and 24 solid forms. A leave-two-compounds-out evaluation tests transfer to unseen compounds.
What the study establishes
Training with a modified SigLIP loss improves ranking and class separability, with a reported mean AUROC of 0.98. This is not a universal accuracy claim: the de Gelder baseline achieves the best thresholded F1 score in the reported comparison.
The broader direction
The goal is to use embeddings as a general basis for analytical chemistry workflows. The workshop establishes an XRPD example, not a validated model for every measurement modality. Extending the approach calls for appropriate experimental data and evaluation for each new task.
Publications & resources
- Automatic solid form classification in pharmaceutical drug development ↗
J. Lange, L. Komissarov, R. Lang, D. D. Enkelmann and A. Anelli · AI4Mat, NeurIPS 2024 workshop
- Read the preprint ↗
SMolNet architecture, training, evaluation and experimental setup